BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F11LP1|AL428947
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 131 2e-30
>3x_Contig1807
Length = 66587
Score = 131 bits (66), Expect = 2e-30
Identities = 148/174 (85%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 406 gaaatacttgttcttttgtagacgttccatgatgagtttgtatacctctgctggagatat 465
||||||||||||||||||||||||||||| || || ||| ||| ||| ||||| |||||
Sbjct: 53986 gaaatacttgttcttttgtagacgttccacgaccagcttgcatatctccgctggtgatat 54045
Query: 466 ccattctagatctttgatataagtttggtatggtaaagagttgattttgtaggacacgta 525
||||| |||||||| ||||||| | |||||||||||||||||||||||||||||| |
Sbjct: 54046 ccattatagatcttcgatataacatgggtatggtaaagagttgattttgtaggacataga 54105
Query: 526 aatctgcg-ctagataagtacattgtgcaaatgcctctggtacttcgtaagacc 578
||| || | | |||||| |||| ||| || ||||||||||||||||||||||
Sbjct: 54106 aatttgtgcccagataatgacatcctgcgaacgcctctggtacttcgtaagacc 54159
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5764
Number of Sequences: 1807
Number of extensions: 5764
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)